Package index • gsClusterDetect

All functions

add_location_counts(): Add location counts to cluster location list
add_spline_threshold(): Use spline lookup to restrict `ObservedExpectedGrid` to potential clusters
check_vars(): check for variables in frame
compress_clusters(): Compress a cluster_alert_table
compress_clusters_fast(): Fast version of compress clusters
counties: County Location Dataset
county_distance_matrix(): Get distance matrix for counties within a state
create_custom_dist_list(): Create a sparse distance list from custom location data
create_dist_list(): Generalized distance list as sparse list
custom_distance_matrix(): Build a Distance Matrix from a Custom Data Frame
example_count_data: Example Count Dataset
find_clusters(): Find clusters
gen_nearby_case_info(): Return baseline and test period case grids restricting by distance
generate_case_grids(): Get candidate clusters and locations in baseline intervals
generate_heatmap(): Generate heatmap of data
generate_heatmap_data(): Get heat map data from a set of location, date, count data
generate_observed_expected(): Generate the observed and expected information
generate_summary_table(): Summary count-by-location-and-date data, given baseline and test interval lengths, and an end-date for the test interval
generate_time_series_data(): Generate time series data
generate_time_series_plot(): Generate timeseries plot data
get_baseline_dates(): Generate baseline dates vector
get_nearby_locations(): Get nearby locations
get_test_dates(): Generate test dates vector
reduce_clusters_to_min(): Filter clusters on minimum overall count
spline_001: Spline Lookup Table - 0.001
spline_005: Spline Lookup Table - 0.005
spline_01: Spline Lookup Table - 0.01
spline_05: Spline Lookup Table - 0.05
st_injects(): Add data counts for parameterized injected clusters
tract_distance_matrix(): Build a Tract Distance Matrix for a State
tract_generator(): Generate Census Tract Centroids for a State
us_distance_matrix(): Get distance matrix for all counties in the US
zip_distance_matrix(): Get distance matrix for zip codes within a state
zipcodes: Zipcode Location Dataset